Corpus GrippeAllemagneV3

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From low to high pathogenicity-Characterization of H7N7 avian influenza viruses in two epidemiologically linked outbreaks.

Identifieur interne : 000041 ( Main/Exploration ); précédent : 000040; suivant : 000042

From low to high pathogenicity-Characterization of H7N7 avian influenza viruses in two epidemiologically linked outbreaks.

Auteurs : Klaas Dietze [Allemagne] ; Annika Graaf [Allemagne] ; Timo Homeier-Bachmann [Allemagne] ; Christian Grund [Allemagne] ; Leonie Forth [Allemagne] ; Anne Pohlmann [Allemagne] ; Christa Jeske [Allemagne] ; Mattis Wintermann [Allemagne] ; Martin Beer [Allemagne] ; Franz J. Conraths [Allemagne] ; Timm Harder [Allemagne]

Source :

RBID : pubmed:29790657

Descripteurs français

English descriptors

Abstract

The ability of low pathogenic (LP) avian influenza viruses (AIV) of the subtypes H5 and H7 to mutate spontaneously to highly pathogenic (HP) variants is the main reason for their stringent control. On-the-spot evidence from the field of mutations in LPAIV to render the virus into nascent HP variants is scarce. Epidemiological investigations and molecular characterization of two spatiotemporally linked outbreaks caused by LP, and subsequently, HPAIV H7N7 in two-layer farms in Germany yielded such evidence. The outbreaks occurred within 45 days on farms 400 m apart. The LP progenitor virus was identified on both farms, with its putative HP inheritor cocirculating and then dominating on the second farm. As postulated before, mutations in the hemagglutinin cleavage site (HACS) proved to be the most decisive change in the genome of HPAIV, in this case, it was mutated from monobasic (LP) PEIPKGR*GLF into polybasic (HP) PEIPKRKRR*GLF. The full-length genome sequences of both viruses were nearly identical with only ten coding mutations outside the HACS scattered along six genome segments in the HPAIV. Five of these were already present as minor variants in the LPAIV quasispecies of the LPAI-only affected farm. H7-specific seroconversion of part of the chicken population together with the codetection of LPAIV HACS sequences in swab samples of the HPAI outbreak farm suggested an initial introduction of the LP progenitor and a subsequent switch to HPAIV H7N7 after the incursion. The findings provide rare field evidence for a shift in pathogenicity of a notifiable AIV infection and re-inforce the validity of current approaches of control measures to curtail low pathogenic H5 and H7 virus circulation in poultry.

DOI: 10.1111/tbed.12906
PubMed: 29790657


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Le document en format XML

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<div type="abstract" xml:lang="en">The ability of low pathogenic (LP) avian influenza viruses (AIV) of the subtypes H5 and H7 to mutate spontaneously to highly pathogenic (HP) variants is the main reason for their stringent control. On-the-spot evidence from the field of mutations in LPAIV to render the virus into nascent HP variants is scarce. Epidemiological investigations and molecular characterization of two spatiotemporally linked outbreaks caused by LP, and subsequently, HPAIV H7N7 in two-layer farms in Germany yielded such evidence. The outbreaks occurred within 45 days on farms 400 m apart. The LP progenitor virus was identified on both farms, with its putative HP inheritor cocirculating and then dominating on the second farm. As postulated before, mutations in the hemagglutinin cleavage site (HACS) proved to be the most decisive change in the genome of HPAIV, in this case, it was mutated from monobasic (LP) PEIPKGR*GLF into polybasic (HP) PEIPKRKRR*GLF. The full-length genome sequences of both viruses were nearly identical with only ten coding mutations outside the HACS scattered along six genome segments in the HPAIV. Five of these were already present as minor variants in the LPAIV quasispecies of the LPAI-only affected farm. H7-specific seroconversion of part of the chicken population together with the codetection of LPAIV HACS sequences in swab samples of the HPAI outbreak farm suggested an initial introduction of the LP progenitor and a subsequent switch to HPAIV H7N7 after the incursion. The findings provide rare field evidence for a shift in pathogenicity of a notifiable AIV infection and re-inforce the validity of current approaches of control measures to curtail low pathogenic H5 and H7 virus circulation in poultry.</div>
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<ELocationID EIdType="doi" ValidYN="Y">10.1111/tbed.12906</ELocationID>
<Abstract>
<AbstractText>The ability of low pathogenic (LP) avian influenza viruses (AIV) of the subtypes H5 and H7 to mutate spontaneously to highly pathogenic (HP) variants is the main reason for their stringent control. On-the-spot evidence from the field of mutations in LPAIV to render the virus into nascent HP variants is scarce. Epidemiological investigations and molecular characterization of two spatiotemporally linked outbreaks caused by LP, and subsequently, HPAIV H7N7 in two-layer farms in Germany yielded such evidence. The outbreaks occurred within 45 days on farms 400 m apart. The LP progenitor virus was identified on both farms, with its putative HP inheritor cocirculating and then dominating on the second farm. As postulated before, mutations in the hemagglutinin cleavage site (HACS) proved to be the most decisive change in the genome of HPAIV, in this case, it was mutated from monobasic (LP) PEIPKGR*GLF into polybasic (HP) PEIPKRKRR*GLF. The full-length genome sequences of both viruses were nearly identical with only ten coding mutations outside the HACS scattered along six genome segments in the HPAIV. Five of these were already present as minor variants in the LPAIV quasispecies of the LPAI-only affected farm. H7-specific seroconversion of part of the chicken population together with the codetection of LPAIV HACS sequences in swab samples of the HPAI outbreak farm suggested an initial introduction of the LP progenitor and a subsequent switch to HPAIV H7N7 after the incursion. The findings provide rare field evidence for a shift in pathogenicity of a notifiable AIV infection and re-inforce the validity of current approaches of control measures to curtail low pathogenic H5 and H7 virus circulation in poultry.</AbstractText>
<CopyrightInformation>© 2018 Blackwell Verlag GmbH.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Dietze</LastName>
<ForeName>Klaas</ForeName>
<Initials>K</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0002-6138-6707</Identifier>
<AffiliationInfo>
<Affiliation>Friedrich-Loeffler-Institut, Greifswald, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Graaf</LastName>
<ForeName>Annika</ForeName>
<Initials>A</Initials>
<AffiliationInfo>
<Affiliation>Friedrich-Loeffler-Institut, Greifswald, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Homeier-Bachmann</LastName>
<ForeName>Timo</ForeName>
<Initials>T</Initials>
<AffiliationInfo>
<Affiliation>Friedrich-Loeffler-Institut, Greifswald, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Grund</LastName>
<ForeName>Christian</ForeName>
<Initials>C</Initials>
<AffiliationInfo>
<Affiliation>Friedrich-Loeffler-Institut, Greifswald, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Forth</LastName>
<ForeName>Leonie</ForeName>
<Initials>L</Initials>
<AffiliationInfo>
<Affiliation>Friedrich-Loeffler-Institut, Greifswald, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Pohlmann</LastName>
<ForeName>Anne</ForeName>
<Initials>A</Initials>
<AffiliationInfo>
<Affiliation>Friedrich-Loeffler-Institut, Greifswald, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Jeske</LastName>
<ForeName>Christa</ForeName>
<Initials>C</Initials>
<AffiliationInfo>
<Affiliation>Niedersächsisches Landesamt für Verbraucherschutz und Lebensmittelsicherheit (LAVES), Wardenburg, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Wintermann</LastName>
<ForeName>Mattis</ForeName>
<Initials>M</Initials>
<AffiliationInfo>
<Affiliation>Veterinäramt, Landkreis Emsland, Meppen, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Beer</LastName>
<ForeName>Martin</ForeName>
<Initials>M</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0002-0598-5254</Identifier>
<AffiliationInfo>
<Affiliation>Friedrich-Loeffler-Institut, Greifswald, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Conraths</LastName>
<ForeName>Franz J</ForeName>
<Initials>FJ</Initials>
<AffiliationInfo>
<Affiliation>Friedrich-Loeffler-Institut, Greifswald, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Harder</LastName>
<ForeName>Timm</ForeName>
<Initials>T</Initials>
<AffiliationInfo>
<Affiliation>Friedrich-Loeffler-Institut, Greifswald, Germany.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<GrantList CompleteYN="Y">
<Grant>
<GrantID>643476</GrantID>
<Agency>European Union's Horizon 2020 programme</Agency>
<Country></Country>
</Grant>
</GrantList>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2018</Year>
<Month>05</Month>
<Day>23</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo>
<Country>Germany</Country>
<MedlineTA>Transbound Emerg Dis</MedlineTA>
<NlmUniqueID>101319538</NlmUniqueID>
<ISSNLinking>1865-1674</ISSNLinking>
</MedlineJournalInfo>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList>
<MeshHeading>
<DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D002645" MajorTopicYN="N">Chickens</DescriptorName>
<QualifierName UI="Q000821" MajorTopicYN="N">virology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D004196" MajorTopicYN="N">Disease Outbreaks</DescriptorName>
<QualifierName UI="Q000662" MajorTopicYN="Y">veterinary</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D016679" MajorTopicYN="N">Genome, Viral</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D005858" MajorTopicYN="N" Type="Geographic">Germany</DescriptorName>
<QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D053126" MajorTopicYN="N">Influenza A Virus, H7N7 Subtype</DescriptorName>
<QualifierName UI="Q000472" MajorTopicYN="Y">pathogenicity</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D005585" MajorTopicYN="N">Influenza in Birds</DescriptorName>
<QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName>
<QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D009154" MajorTopicYN="N">Mutation</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D011200" MajorTopicYN="N">Poultry</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D011201" MajorTopicYN="N">Poultry Diseases</DescriptorName>
<QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName>
<QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D014774" MajorTopicYN="N">Virulence</DescriptorName>
</MeshHeading>
</MeshHeadingList>
<KeywordList Owner="NOTNLM">
<Keyword MajorTopicYN="N">H7</Keyword>
<Keyword MajorTopicYN="N">avian influenza</Keyword>
<Keyword MajorTopicYN="N">disease control</Keyword>
<Keyword MajorTopicYN="N">molecular epidemiology</Keyword>
<Keyword MajorTopicYN="N">outbreak investigation</Keyword>
<Keyword MajorTopicYN="N">pathogenicity</Keyword>
<Keyword MajorTopicYN="N">quasispecies</Keyword>
</KeywordList>
</MedlineCitation>
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<History>
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<Year>2017</Year>
<Month>12</Month>
<Day>22</Day>
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<PubMedPubDate PubStatus="revised">
<Year>2018</Year>
<Month>04</Month>
<Day>09</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted">
<Year>2018</Year>
<Month>04</Month>
<Day>13</Day>
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<PubMedPubDate PubStatus="pubmed">
<Year>2018</Year>
<Month>5</Month>
<Day>24</Day>
<Hour>6</Hour>
<Minute>0</Minute>
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<Year>2019</Year>
<Month>1</Month>
<Day>19</Day>
<Hour>6</Hour>
<Minute>0</Minute>
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<PubMedPubDate PubStatus="entrez">
<Year>2018</Year>
<Month>5</Month>
<Day>24</Day>
<Hour>6</Hour>
<Minute>0</Minute>
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</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">29790657</ArticleId>
<ArticleId IdType="doi">10.1111/tbed.12906</ArticleId>
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<list>
<country>
<li>Allemagne</li>
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<tree>
<country name="Allemagne">
<noRegion>
<name sortKey="Dietze, Klaas" sort="Dietze, Klaas" uniqKey="Dietze K" first="Klaas" last="Dietze">Klaas Dietze</name>
</noRegion>
<name sortKey="Beer, Martin" sort="Beer, Martin" uniqKey="Beer M" first="Martin" last="Beer">Martin Beer</name>
<name sortKey="Conraths, Franz J" sort="Conraths, Franz J" uniqKey="Conraths F" first="Franz J" last="Conraths">Franz J. Conraths</name>
<name sortKey="Forth, Leonie" sort="Forth, Leonie" uniqKey="Forth L" first="Leonie" last="Forth">Leonie Forth</name>
<name sortKey="Graaf, Annika" sort="Graaf, Annika" uniqKey="Graaf A" first="Annika" last="Graaf">Annika Graaf</name>
<name sortKey="Grund, Christian" sort="Grund, Christian" uniqKey="Grund C" first="Christian" last="Grund">Christian Grund</name>
<name sortKey="Harder, Timm" sort="Harder, Timm" uniqKey="Harder T" first="Timm" last="Harder">Timm Harder</name>
<name sortKey="Homeier Bachmann, Timo" sort="Homeier Bachmann, Timo" uniqKey="Homeier Bachmann T" first="Timo" last="Homeier-Bachmann">Timo Homeier-Bachmann</name>
<name sortKey="Jeske, Christa" sort="Jeske, Christa" uniqKey="Jeske C" first="Christa" last="Jeske">Christa Jeske</name>
<name sortKey="Pohlmann, Anne" sort="Pohlmann, Anne" uniqKey="Pohlmann A" first="Anne" last="Pohlmann">Anne Pohlmann</name>
<name sortKey="Wintermann, Mattis" sort="Wintermann, Mattis" uniqKey="Wintermann M" first="Mattis" last="Wintermann">Mattis Wintermann</name>
</country>
</tree>
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</record>

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